Data Processing With The Pros Reloaded

Trypsin S-SAD Phasing: How Low (In Frames) Can You Go?

This dataset was recorded from a trypsin crystal for S-SAD phasing (calcium is also present). 3600 out of a total of 7200 frames were uploaded. Phasing is straightforward with 3600 frames included, however 1800 is more difficult to build a complete model.

Useful Information

Data kindly provided by: Prof. Min Yao at Hokkaido University, Japan.
Sample: Trypsin
Beamline where data were collected: BL-1A, Photon Factory
Wavelength: 2.7 Å
Detector: Pilatus 2M
Oscillation angle: 0.1 degree
Exposure: 0.1 sec/frame
Distance: 65 mm
Beam size: 10 x 25 µm2
Image file format: .cbf file extension (crystalographic binary file)
Protein sequence in FASTA format

Two options to download the data:

    Option 1 (easiest):

Use 'rsync' (linux/UNIX command) to download the compressed image files (command is in between quotes and should only be one line). There are 3600, but each file is approximately 270 kb:

"rsync -azv anonymous@bl831.als.lbl.gov:pub/ACA2014/Min.Yao_trypsin_4.6keV/ ."

and you will be prompted to enter 'lysozyme'.

    Option 2:

Use Wget to download the 'wloop_1_#####.cbf.bz2' images (try this if you have a Windows OS).

Processed Data and Instructions

  HKL-3000 iMosflm XDS PROTEUM2
Processed Data Files TBA TBA TBA TBA
Log Files TBA TBA TBA TBA
Author Instructions Wladek Minor Harry Powell Keitaro Yamashita Michael Ruf
SFCheck Output For HKL-3000 file For iMosflm file For XDS file For PROTEUM2 file