####  MAD data collection recommendations using Zinc as an example
#  
#  Move the Monochromator Energy to the Absorption Energy of interest
>  wave.com Zn

# Attenuate the beam by lowering the Horizontal divergence to 0.5 milliRad (from the default Max of 2.0)
>  divergence.com .5

#  Tuneup the beamline
>  tuneup.com

#  After tuning up  press "Update" in BLUICE Run0 "Collect" TAB to read in correct Energy for Zn

#  Find a crystal that diffracts well, then 

###
###     #  Autoindex the crystal
###
>  index

#  If it can produce a Collection Strategy, do the following in the BLUICE Run_1 Window/Tab it created
#  (1) Use the recommended Starting Phi angle
#  (2) Accept, or set a new "delta" or oscillation angle
#  (3) Set total data collect range to be 180 degrees of data
#  (4) Click on Inverse beam
#  (5) Set the SubDirectory for the Data Collection.

###
###     #  Perform a Fluorescence or MAD Scan
### 

#  Press the "SCAN" Tab 
#  Click on MAD "Scan Mode"
#  Click on "Periodic Table" Sub-Tab, if not already active, 
#  Click on the Edge of interest, Zn-K for this example.
#  Click on "Update" to have the scan write to the new Data Collection SubDirectory 
#  Start the Scan by Clicking on "Scan", will take ~10 minutes to complete
#  Click on "PLOT" Sub-Tab, to see the data output from the Scan

#  After the Scan completes it will list 3 energies:
#       Inflection, Peak, and Remote
#  Compute the arithmetic Mean Energy of the Peak and Inflection Energies  (Peak + Inflection)/2

###
###     #  Update the Run_1 Data Collection Setup
### 

#  Return to the Run_1 Collect Tab 
#  (1) Press "Update" to read in the 3 energies from the MAD Scan
#  (2) Delete either the PEAK or the INFLECTION engery, leave the REMOTE engery as it is.
#  (3) Enter the Mean Engery, calculated previously, by overwriting the Energy you did NOT delete
#  You should now have 2 energies Mean and Remote 
#  (4) Make the "Wedge Size 30 degrees

###
###     #  Determine the Exposure Time for the MAD Diffraction Data Collection
### 

#   Enter  "exposure_time.com" to calculate the allowable exposure time for each frame.
>  exposure_time.com

#    (1) Do NOT take the default of NOT measuring the flux, i.e. enter "y" or "yes" to measure the beam flux
>   y

#   This will prompt you to move crystal out of the beam 
#   In the HUTCH Tab, click in the "Sample" video until the crystal is NOT in the beam circle; press enter.
>  "enter/return"

#   After the flux is measured the crystal will be returned to its previous location 
#   The script should use the Run_1 parameters.
#   Make sure it using the appropriate "Max total Dose" for a MAD Scan, [5e6] for it's calculation
#   
>  What is the Max total dose YOU want: [5e+6] --> 
>  "enter/return"

#   If it calculates an exposure of at least 0.1  seconds per frame you 
#   (1)  Enter that exposure time into the COLLECT Tab Run_1 "Time"
#   (2) double check your cystal is still centered
#   (3) Press "Collect" in the COLLECT Tab, and START the RUN!

#   If "exposure_time.com" did NOT calculate an exposure time of at least 0.1  seconds per frame, 
#       you need to attenuate more!
#   Try "divergence.com .35"  and run again
>  divergence.com .35

#   If that doesn't attenuate enough try  "divergence.com .25 .25"
>  divergence.com .25 .25

#   If that doesn't attenuate enough try to Reduce the total number of frames by decreasing the oscillation angle.
#   Then run "exposure_time.com" again, and repeat until you succeed.